more fixes

.gitignore

@@ -2,3 +2,4 @@
 *.jl.*.cov
 *.jl.mem
 *.DS_Store
+Manifest.toml

.travis.yml

@@ -16,16 +16,13 @@ branches:
 jobs:
   include:
     - stage: deploy
-      julia: 0.7
+      julia: nightly
       os: linux
       script:
-        - julia -e 'Pkg.clone(pwd()); Pkg.build("Literate")'
+        - julia docs/make.jl
-        - julia -e 'Pkg.add("Documenter"); Pkg.add("Plots"); Pkg.build("Plots")'
-        - julia -e 'cd(Pkg.dir("Literate")); include("docs/make.jl")'
 notifications:
   email: false
 git:
   depth: 99999999
 after_success:
-  # push coverage results to Codecov
+  - julia test/coverage.jl
-  - julia -e 'cd(Pkg.dir("Literate")); Pkg.add("Coverage"); using Coverage; Codecov.submit(Codecov.process_folder())'

Project.toml

@@ -0,0 +1,11 @@
+name = "Literate"
+uuid = "98b081ad-f1c9-55d3-8b20-4c87d4299306"
+version = "0.2.2"
+
+[deps]
+Base64 = "2a0f44e3-6c83-55bd-87e4-b1978d98bd5f"
+JSON = "682c06a0-de6a-54ab-a142-c8b1cf79cde6"
+REPL = "3fa0cd96-eef1-5676-8a61-b3b8758bbffb"
+
+[targets.test.deps]
+Test = "8dfed614-e22c-5e08-85e1-65c5234f0b40"

appveyor.yml

@@ -1,14 +1,14 @@
 environment:
   matrix:
-  - JULIA_URL: "https://julialang-s3.julialang.org/bin/winnt/x86/0.6/julia-0.7-latest-win32.exe"
+  - JULIA_URL: "https://julialang-s3.julialang.org/bin/winnt/x86/0.7/julia-0.7-latest-win32.exe"
-  - JULIA_URL: "https://julialang-s3.julialang.org/bin/winnt/x64/0.6/julia-0.7-latest-win64.exe"
+  - JULIA_URL: "https://julialang-s3.julialang.org/bin/winnt/x64/0.7/julia-0.7-latest-win64.exe"
   - JULIA_URL: "https://julialangnightlies-s3.julialang.org/bin/winnt/x86/julia-latest-win32.exe"
   - JULIA_URL: "https://julialangnightlies-s3.julialang.org/bin/winnt/x64/julia-latest-win64.exe"
 
-matrix:
+# matrix:
- allow_failures:
+#  allow_failures:
- - JULIA_URL: "https://julialangnightlies-s3.julialang.org/bin/winnt/x86/julia-latest-win32.exe"
+#  - JULIA_URL: "https://julialangnightlies-s3.julialang.org/bin/winnt/x86/julia-latest-win32.exe"
- - JULIA_URL: "https://julialangnightlies-s3.julialang.org/bin/winnt/x64/julia-latest-win64.exe"
+#  - JULIA_URL: "https://julialangnightlies-s3.julialang.org/bin/winnt/x64/julia-latest-win64.exe"
 
 branches:
   only:

docs/make.jl

@@ -1,10 +1,12 @@
+using Pkg
+pkg"add Plots#master"
+pkg"add GR#master"
+pkg"add Documenter"
+pkg"precompile"
+
 using Documenter
 using Literate
 
-# import these to make sure they precompile here instead of when generating output
-import Plots
-import GR
-
 # generate examples
 EXAMPLE = joinpath(@__DIR__, "..", "examples", "example.jl")
 OUTPUT = joinpath(@__DIR__, "src/generated")
@@ -53,7 +55,7 @@ deploydocs(
     repo = "github.com/fredrikekre/Literate.jl.git",
     target = "build",
     osname = "linux",
-    julia = "0.6",
+    julia = "nightly",
     deps = nothing,
     make = nothing
 )

docs/src/outputformats.md

@@ -4,6 +4,7 @@ When the source is parsed, and have been processed it is time to render the outp
 We will consider the following source snippet:
 
 ```@eval
+import Markdown
 Markdown.parse("```julia\n" * rstrip(read("outputformats.jl", String)) * "\n```")
 ```
 
@@ -14,7 +15,8 @@ and see how this is rendered in each of the output formats.
 The (default) markdown output of the source snippet above is as follows
 
 ```@eval
-file = joinpath(@__DIR__,  "src/generated/name.md")
+import Markdown
+file = joinpath(@__DIR__, "../src/generated/name.md")
 str = "````markdown\n" * rstrip(read(file, String)) * "\n````"
 rm(file)
 Markdown.parse(str)
@@ -55,7 +57,8 @@ Literate.notebook
 The (default) script output of the source snippet above is as follows
 
 ```@eval
-file = joinpath(@__DIR__,  "src/generated/outputformats.jl")
+import Markdown
+file = joinpath(@__DIR__,  "../src/generated/outputformats.jl")
 str = "```julia\n" * rstrip(read(file, String)) * "\n```"
 rm(file)
 Markdown.parse(str)

src/Documenter.jl

@@ -1,7 +1,6 @@
 # this file contains some utilities copied from the Documenter.jl package
 # (https://github.com/JuliaDocs/Documenter.jl), see LICENSE.md for license
 module Documenter
-using Logging
 
 function withoutput(f)
     # Save the default output streams.
@@ -14,14 +13,14 @@ function withoutput(f)
     redirect_stdout(pipe.in)
     redirect_stderr(pipe.in)
     # Also redirect logging stream to the same pipe
-    logger = ConsoleLogger(pipe.in)
+    logger = Base.CoreLogging.SimpleLogger(pipe.in)
 
     # Bytes written to the `pipe` are captured in `output` and converted to a `String`.
     output = UInt8[]
 
     # Run the function `f`, capturing all output that it might have generated.
     # Success signals whether the function `f` did or did not throw an exception.
-    result, success, backtrace = with_logger(logger) do
+    result, success, backtrace = Base.CoreLogging.with_logger(logger) do
         try
             f(), true, Vector{Ptr{Cvoid}}()
         catch err

src/Literate.jl

@@ -319,18 +319,12 @@ function markdown(inputfile, outputdir; preprocess = identity, postprocess = ide
         # change the Edit on GitHub link
         repo = get(ENV, "TRAVIS_REPO_SLUG", nothing)
         build_dir = get(ENV, "TRAVIS_BUILD_DIR", nothing)
-        @show build_dir
-        if build_dir !== nothing
-            @show relpath(inputfile, build_dir)
-        end
         if repo === nothing
-            println("repo === nothing")
             path = ""
         else
             pkg = String(first(split(last(split(repo, '/')), '.')))
             pkgsrc = Base.find_package(pkg)
             if pkgsrc === nothing
-                println("pkgsrc === nothing")
                 path = ""
             else
                 repo_root = first(split(pkgsrc, "src/" * pkg * ".jl"))
@@ -533,7 +527,7 @@ function execute_notebook(nb)
             stream = Dict{String,Any}()
             stream["output_type"] = "stream"
             stream["name"] = "stdout"
-            stream["text"] = collect(Any, eachline(IOBuffer(String(str)), chomp = false)) # 0.7 chomp = false => keep = true
+            stream["text"] = collect(Any, eachline(IOBuffer(String(str)), keep = true))
             push!(cell["outputs"], stream)
         end
 
@@ -550,7 +544,7 @@ function execute_notebook(nb)
             # we need to split some mime types into vectors of lines instead of a single string
             for mime in ("image/svg+xml", "text/html")
                 if haskey(dd, mime)
-                    dd[mime] = collect(Any, eachline(IOBuffer(dd[mime]), chomp = false))
+                    dd[mime] = collect(Any, eachline(IOBuffer(dd[mime]), keep = true))
                 end
             end
             execute_result["data"] = dd

test/coverage.jl

@@ -0,0 +1,6 @@
+using Pkg
+Pkg.add("Coverage")
+using Coverage
+cd(joinpath(@__DIR__, "..")) do
+    Codecov.submit(Codecov.process_folder())
+end