Drop support for Julia < 1.10. (#27)

.github/workflows/Documentation.yml

@@ -0,0 +1,27 @@
+---
+name: Documentation
+on:
+  push:
+    branches:
+      - 'master'
+      - 'release-'
+    tags: ['*']
+  pull_request:
+
+jobs:
+  docs:
+    name: Julia 1.11 - ubuntu-latest
+    runs-on: ubuntu-latest
+    steps:
+      - uses: actions/checkout@v4
+      - uses: julia-actions/setup-julia@v2
+        with:
+          version: '1.11'
+      - uses: julia-actions/cache@v2
+      - name: Install dependencies
+        run: julia --project=docs -e 'using Pkg; Pkg.instantiate()'
+      - name: Build and deploy
+        env:
+          GITHUB_TOKEN: ${{ secrets.GITHUB_TOKEN }}
+          DOCUMENTER_KEY: ${{ secrets.DOCUMENTER_KEY }}
+        run: julia --project=docs --color=yes docs/make.jl

.github/workflows/Test.yml

@@ -1,11 +1,11 @@
-name: CI
+name: Test
 
 on:
   push:
     branches:
       - 'master'
       - 'release-'
-    tags: '*'
+    tags: ['*']
   pull_request:
 
 jobs:
@@ -15,7 +15,7 @@ jobs:
     strategy:
       matrix:
         version:
-          - '1.6'
+          - '1.10'
           - '1'
           - 'nightly'
         os:
@@ -39,19 +39,3 @@ jobs:
           files: lcov.info
         env:
           CODECOV_TOKEN: ${{ secrets.CODECOV_TOKEN }}
-  docs:
-    name: Documentation
-    runs-on: ubuntu-latest
-    steps:
-      - uses: actions/checkout@v4
-      - uses: julia-actions/setup-julia@v2
-        with:
-          version: '1'
-      - uses: julia-actions/cache@v2
-      - name: Install dependencies
-        run: julia --project=docs -e 'using Pkg; Pkg.instantiate()'
-      - name: Build and deploy
-        env:
-          GITHUB_TOKEN: ${{ secrets.GITHUB_TOKEN }}
-          DOCUMENTER_KEY: ${{ secrets.DOCUMENTER_KEY }}
-        run: julia --project=docs --color=yes docs/make.jl

Project.toml

@@ -1,15 +1,12 @@
 name = "HYPRE"
 uuid = "b5ffcf37-a2bd-41ab-a3da-4bd9bc8ad771"
-version = "1.6.0"
+version = "1.7.0"
 
 [deps]
 CEnum = "fa961155-64e5-5f13-b03f-caf6b980ea82"
 HYPRE_jll = "0a602bbd-b08b-5d75-8d32-0de6eef44785"
 Libdl = "8f399da3-3557-5675-b5ff-fb832c97cbdb"
 MPI = "da04e1cc-30fd-572f-bb4f-1f8673147195"
-PartitionedArrays = "5a9dfac6-5c52-46f7-8278-5e2210713be9"
-SparseArrays = "2f01184e-e22b-5df5-ae63-d93ebab69eaf"
-SparseMatricesCSR = "a0a7dd2c-ebf4-11e9-1f05-cf50bc540ca1"
 
 [weakdeps]
 PartitionedArrays = "5a9dfac6-5c52-46f7-8278-5e2210713be9"
@@ -26,7 +23,7 @@ CEnum = "0.4, 0.5"
 MPI = "0.19, 0.20"
 PartitionedArrays = "0.5"
 SparseMatricesCSR = "0.6"
-julia = "1.6"
+julia = "1.10"
 
 [extras]
 LinearAlgebra = "37e2e46d-f89d-539d-b4ee-838fcccc9c8e"

docs/Manifest.toml

@@ -1,6 +1,6 @@
 # This file is machine-generated - editing it directly is not advised
 
-julia_version = "1.10.5"
+julia_version = "1.11.0"
 manifest_format = "2.0"
 project_hash = "59b08f4b60c862a102ba6a5a40dd11b11cb0ae51"
 
@@ -10,24 +10,26 @@ uuid = "a4c015fc-c6ff-483c-b24f-f7ea428134e9"
 version = "0.0.1"
 
 [[deps.AbstractTrees]]
-git-tree-sha1 = "faa260e4cb5aba097a73fab382dd4b5819d8ec8c"
+git-tree-sha1 = "2d9c9a55f9c93e8887ad391fbae72f8ef55e1177"
 uuid = "1520ce14-60c1-5f80-bbc7-55ef81b5835c"
-version = "0.4.4"
+version = "0.4.5"
 
 [[deps.ArgTools]]
 uuid = "0dad84c5-d112-42e6-8d28-ef12dabb789f"
-version = "1.1.1"
+version = "1.1.2"
 
 [[deps.Artifacts]]
 uuid = "56f22d72-fd6d-98f1-02f0-08ddc0907c33"
+version = "1.11.0"
 
 [[deps.Base64]]
 uuid = "2a0f44e3-6c83-55bd-87e4-b1978d98bd5f"
+version = "1.11.0"
 
 [[deps.CEnum]]
-git-tree-sha1 = "eb4cb44a499229b3b8426dcfb5dd85333951ff90"
+git-tree-sha1 = "389ad5c84de1ae7cf0e28e381131c98ea87d54fc"
 uuid = "fa961155-64e5-5f13-b03f-caf6b980ea82"
-version = "0.4.2"
+version = "0.5.0"
 
 [[deps.Changelog]]
 git-tree-sha1 = "e579c6157598169ad4ef17263bdf3452b4a3e316"
@@ -48,10 +50,12 @@ version = "1.1.1+0"
 [[deps.Dates]]
 deps = ["Printf"]
 uuid = "ade2ca70-3891-5945-98fb-dc099432e06a"
+version = "1.11.0"
 
 [[deps.Distributed]]
 deps = ["Random", "Serialization", "Sockets"]
 uuid = "8ba89e20-285c-5b6f-9357-94700520ee1b"
+version = "1.11.0"
 
 [[deps.DocStringExtensions]]
 deps = ["LibGit2"]
@@ -78,6 +82,7 @@ version = "2.6.2+0"
 
 [[deps.FileWatching]]
 uuid = "7b1f6079-737a-58dc-b8bc-7a2ca5c1b5ee"
+version = "1.11.0"
 
 [[deps.Git]]
 deps = ["Git_jll"]
@@ -95,7 +100,7 @@ version = "2.46.2+0"
 deps = ["CEnum", "HYPRE_jll", "Libdl", "MPI"]
 path = ".."
 uuid = "b5ffcf37-a2bd-41ab-a3da-4bd9bc8ad771"
-version = "1.6.0"
+version = "1.7.0"
 
     [deps.HYPRE.extensions]
     HYPREPartitionedArrays = ["PartitionedArrays", "SparseArrays", "SparseMatricesCSR"]
@@ -113,21 +118,28 @@ git-tree-sha1 = "b77d3eca75f8442e034ccf415c87405a49e77985"
 uuid = "0a602bbd-b08b-5d75-8d32-0de6eef44785"
 version = "2.23.1+1"
 
+[[deps.Hwloc_jll]]
+deps = ["Artifacts", "JLLWrappers", "Libdl"]
+git-tree-sha1 = "dd3b49277ec2bb2c6b94eb1604d4d0616016f7a6"
+uuid = "e33a78d0-f292-5ffc-b300-72abe9b543c8"
+version = "2.11.2+0"
+
 [[deps.IOCapture]]
 deps = ["Logging", "Random"]
-git-tree-sha1 = "d75853a0bdbfb1ac815478bacd89cd27b550ace6"
+git-tree-sha1 = "b6d6bfdd7ce25b0f9b2f6b3dd56b2673a66c8770"
 uuid = "b5f81e59-6552-4d32-b1f0-c071b021bf89"
-version = "0.2.3"
+version = "0.2.5"
 
 [[deps.InteractiveUtils]]
 deps = ["Markdown"]
 uuid = "b77e0a4c-d291-57a0-90e8-8db25a27a240"
+version = "1.11.0"
 
 [[deps.JLLWrappers]]
-deps = ["Preferences"]
+deps = ["Artifacts", "Preferences"]
-git-tree-sha1 = "abc9885a7ca2052a736a600f7fa66209f96506e1"
+git-tree-sha1 = "f389674c99bfcde17dc57454011aa44d5a260a40"
 uuid = "692b3bcd-3c85-4b1f-b108-f13ce0eb3210"
-version = "1.4.1"
+version = "1.6.0"
 
 [[deps.JSON]]
 deps = ["Dates", "Mmap", "Parsers", "Unicode"]
@@ -137,9 +149,9 @@ version = "0.21.4"
 
 [[deps.LAPACK_jll]]
 deps = ["Artifacts", "CompilerSupportLibraries_jll", "JLLWrappers", "Libdl", "libblastrampoline_jll"]
-git-tree-sha1 = "cc6ca91b2ca8d3600478d40097d30a6f046d0759"
+git-tree-sha1 = "1b25c30fa49db281be615793e0f85282a8f22822"
 uuid = "51474c39-65e3-53ba-86ba-03b1b862ec14"
-version = "3.11.0+0"
+version = "3.12.0+2"
 
 [[deps.LazilyInitializedFields]]
 git-tree-sha1 = "8f7f3cabab0fd1800699663533b6d5cb3fc0e612"
@@ -149,6 +161,7 @@ version = "1.2.2"
 [[deps.LazyArtifacts]]
 deps = ["Artifacts", "Pkg"]
 uuid = "4af54fe1-eca0-43a8-85a7-787d91b784e3"
+version = "1.11.0"
 
 [[deps.LibCURL]]
 deps = ["LibCURL_jll", "MozillaCACerts_jll"]
@@ -158,16 +171,17 @@ version = "0.6.4"
 [[deps.LibCURL_jll]]
 deps = ["Artifacts", "LibSSH2_jll", "Libdl", "MbedTLS_jll", "Zlib_jll", "nghttp2_jll"]
 uuid = "deac9b47-8bc7-5906-a0fe-35ac56dc84c0"
-version = "8.4.0+0"
+version = "8.6.0+0"
 
 [[deps.LibGit2]]
 deps = ["Base64", "LibGit2_jll", "NetworkOptions", "Printf", "SHA"]
 uuid = "76f85450-5226-5b5a-8eaa-529ad045b433"
+version = "1.11.0"
 
 [[deps.LibGit2_jll]]
 deps = ["Artifacts", "LibSSH2_jll", "Libdl", "MbedTLS_jll"]
 uuid = "e37daf67-58a4-590a-8e99-b0245dd2ffc5"
-version = "1.6.4+0"
+version = "1.7.2+0"
 
 [[deps.LibSSH2_jll]]
 deps = ["Artifacts", "Libdl", "MbedTLS_jll"]
@@ -176,6 +190,7 @@ version = "1.11.0+1"
 
 [[deps.Libdl]]
 uuid = "8f399da3-3557-5675-b5ff-fb832c97cbdb"
+version = "1.11.0"
 
 [[deps.Libiconv_jll]]
 deps = ["Artifacts", "JLLWrappers", "Libdl"]
@@ -185,12 +200,13 @@ version = "1.17.0+0"
 
 [[deps.Logging]]
 uuid = "56ddb016-857b-54e1-b83d-db4d58db5568"
+version = "1.11.0"
 
 [[deps.MPI]]
-deps = ["Distributed", "DocStringExtensions", "Libdl", "MPICH_jll", "MPIPreferences", "MPItrampoline_jll", "MicrosoftMPI_jll", "OpenMPI_jll", "PrecompileTools", "Requires", "Serialization", "Sockets"]
+deps = ["Distributed", "DocStringExtensions", "Libdl", "MPICH_jll", "MPIPreferences", "MPItrampoline_jll", "MicrosoftMPI_jll", "OpenMPI_jll", "PkgVersion", "PrecompileTools", "Requires", "Serialization", "Sockets"]
-git-tree-sha1 = "cef80bd5aad97224a3937596066c21a37dca3990"
+git-tree-sha1 = "892676019c58f34e38743bc989b0eca5bce5edc5"
 uuid = "da04e1cc-30fd-572f-bb4f-1f8673147195"
-version = "0.20.9"
+version = "0.20.22"
 
     [deps.MPI.extensions]
     AMDGPUExt = "AMDGPU"
@@ -201,50 +217,52 @@ version = "0.20.9"
     CUDA = "052768ef-5323-5732-b1bb-66c8b64840ba"
 
 [[deps.MPICH_jll]]
-deps = ["Artifacts", "CompilerSupportLibraries_jll", "JLLWrappers", "LazyArtifacts", "Libdl", "MPIPreferences", "TOML"]
+deps = ["Artifacts", "CompilerSupportLibraries_jll", "Hwloc_jll", "JLLWrappers", "LazyArtifacts", "Libdl", "MPIPreferences", "TOML"]
-git-tree-sha1 = "d790fbd913f85e8865c55bf4725aff197c5155c8"
+git-tree-sha1 = "7715e65c47ba3941c502bffb7f266a41a7f54423"
 uuid = "7cb0a576-ebde-5e09-9194-50597f1243b4"
-version = "4.1.1+1"
+version = "4.2.3+0"
 
 [[deps.MPIPreferences]]
 deps = ["Libdl", "Preferences"]
-git-tree-sha1 = "71f937129731a29eabe6969db2c90368a4408933"
+git-tree-sha1 = "c105fe467859e7f6e9a852cb15cb4301126fac07"
 uuid = "3da0fdf6-3ccc-4f1b-acd9-58baa6c99267"
-version = "0.1.7"
+version = "0.1.11"
 
 [[deps.MPItrampoline_jll]]
 deps = ["Artifacts", "CompilerSupportLibraries_jll", "JLLWrappers", "LazyArtifacts", "Libdl", "MPIPreferences", "TOML"]
-git-tree-sha1 = "b3dcf8e1c610a10458df3c62038c8cc3a4d6291d"
+git-tree-sha1 = "70e830dab5d0775183c99fc75e4c24c614ed7142"
 uuid = "f1f71cc9-e9ae-5b93-9b94-4fe0e1ad3748"
-version = "5.3.0+0"
+version = "5.5.1+0"
 
 [[deps.Markdown]]
 deps = ["Base64"]
 uuid = "d6f4376e-aef5-505a-96c1-9c027394607a"
+version = "1.11.0"
 
 [[deps.MarkdownAST]]
 deps = ["AbstractTrees", "Markdown"]
-git-tree-sha1 = "e8513266815200c0c8f522d6d44ffb5e9b366ae4"
+git-tree-sha1 = "465a70f0fc7d443a00dcdc3267a497397b8a3899"
 uuid = "d0879d2d-cac2-40c8-9cee-1863dc0c7391"
-version = "0.1.1"
+version = "0.1.2"
 
 [[deps.MbedTLS_jll]]
 deps = ["Artifacts", "Libdl"]
 uuid = "c8ffd9c3-330d-5841-b78e-0817d7145fa1"
-version = "2.28.2+1"
+version = "2.28.6+0"
 
 [[deps.MicrosoftMPI_jll]]
 deps = ["Artifacts", "JLLWrappers", "Libdl", "Pkg"]
-git-tree-sha1 = "a8027af3d1743b3bfae34e54872359fdebb31422"
+git-tree-sha1 = "f12a29c4400ba812841c6ace3f4efbb6dbb3ba01"
 uuid = "9237b28f-5490-5468-be7b-bb81f5f5e6cf"
-version = "10.1.3+4"
+version = "10.1.4+2"
 
 [[deps.Mmap]]
 uuid = "a63ad114-7e13-5084-954f-fe012c677804"
+version = "1.11.0"
 
 [[deps.MozillaCACerts_jll]]
 uuid = "14a3606d-f60d-562e-9121-12d972cd8159"
-version = "2023.1.10"
+version = "2023.12.12"
 
 [[deps.NetworkOptions]]
 uuid = "ca575930-c2e3-43a9-ace4-1e988b2c1908"
@@ -253,13 +271,13 @@ version = "1.2.0"
 [[deps.OpenBLAS_jll]]
 deps = ["Artifacts", "CompilerSupportLibraries_jll", "Libdl"]
 uuid = "4536629a-c528-5b80-bd46-f80d51c5b363"
-version = "0.3.23+4"
+version = "0.3.27+1"
 
 [[deps.OpenMPI_jll]]
-deps = ["Artifacts", "CompilerSupportLibraries_jll", "JLLWrappers", "LazyArtifacts", "Libdl", "MPIPreferences", "TOML"]
+deps = ["Artifacts", "CompilerSupportLibraries_jll", "Hwloc_jll", "JLLWrappers", "LazyArtifacts", "Libdl", "MPIPreferences", "TOML", "Zlib_jll"]
-git-tree-sha1 = "f3080f4212a8ba2ceb10a34b938601b862094314"
+git-tree-sha1 = "bfce6d523861a6c562721b262c0d1aaeead2647f"
 uuid = "fe0851c0-eecd-5654-98d4-656369965a5c"
-version = "4.1.5+0"
+version = "5.0.5+0"
 
 [[deps.OpenSSL_jll]]
 deps = ["Artifacts", "JLLWrappers", "Libdl"]
@@ -274,38 +292,51 @@ version = "10.42.0+1"
 
 [[deps.Parsers]]
 deps = ["Dates", "PrecompileTools", "UUIDs"]
-git-tree-sha1 = "a5aef8d4a6e8d81f171b2bd4be5265b01384c74c"
+git-tree-sha1 = "8489905bcdbcfac64d1daa51ca07c0d8f0283821"
 uuid = "69de0a69-1ddd-5017-9359-2bf0b02dc9f0"
-version = "2.5.10"
+version = "2.8.1"
 
 [[deps.Pkg]]
-deps = ["Artifacts", "Dates", "Downloads", "FileWatching", "LibGit2", "Libdl", "Logging", "Markdown", "Printf", "REPL", "Random", "SHA", "Serialization", "TOML", "Tar", "UUIDs", "p7zip_jll"]
+deps = ["Artifacts", "Dates", "Downloads", "FileWatching", "LibGit2", "Libdl", "Logging", "Markdown", "Printf", "Random", "SHA", "TOML", "Tar", "UUIDs", "p7zip_jll"]
 uuid = "44cfe95a-1eb2-52ea-b672-e2afdf69b78f"
-version = "1.10.0"
+version = "1.11.0"
+weakdeps = ["REPL"]
+
+    [deps.Pkg.extensions]
+    REPLExt = "REPL"
+
+[[deps.PkgVersion]]
+deps = ["Pkg"]
+git-tree-sha1 = "f9501cc0430a26bc3d156ae1b5b0c1b47af4d6da"
+uuid = "eebad327-c553-4316-9ea0-9fa01ccd7688"
+version = "0.3.3"
 
 [[deps.PrecompileTools]]
 deps = ["Preferences"]
-git-tree-sha1 = "259e206946c293698122f63e2b513a7c99a244e8"
+git-tree-sha1 = "5aa36f7049a63a1528fe8f7c3f2113413ffd4e1f"
 uuid = "aea7be01-6a6a-4083-8856-8a6e6704d82a"
-version = "1.1.1"
+version = "1.2.1"
 
 [[deps.Preferences]]
 deps = ["TOML"]
-git-tree-sha1 = "7eb1686b4f04b82f96ed7a4ea5890a4f0c7a09f1"
+git-tree-sha1 = "9306f6085165d270f7e3db02af26a400d580f5c6"
 uuid = "21216c6a-2e73-6563-6e65-726566657250"
-version = "1.4.0"
+version = "1.4.3"
 
 [[deps.Printf]]
 deps = ["Unicode"]
 uuid = "de0858da-6303-5e67-8744-51eddeeeb8d7"
+version = "1.11.0"
 
 [[deps.REPL]]
-deps = ["InteractiveUtils", "Markdown", "Sockets", "Unicode"]
+deps = ["InteractiveUtils", "Markdown", "Sockets", "StyledStrings", "Unicode"]
 uuid = "3fa0cd96-eef1-5676-8a61-b3b8758bbffb"
+version = "1.11.0"
 
 [[deps.Random]]
 deps = ["SHA"]
 uuid = "9a3f8284-a2c9-5f02-9a11-845980a1fd5c"
+version = "1.11.0"
 
 [[deps.RegistryInstances]]
 deps = ["LazilyInitializedFields", "Pkg", "TOML", "Tar"]
@@ -325,9 +356,15 @@ version = "0.7.0"
 
 [[deps.Serialization]]
 uuid = "9e88b42a-f829-5b0c-bbe9-9e923198166b"
+version = "1.11.0"
 
 [[deps.Sockets]]
 uuid = "6462fe0b-24de-5631-8697-dd941f90decc"
+version = "1.11.0"
+
+[[deps.StyledStrings]]
+uuid = "f489334b-da3d-4c2e-b8f0-e476e12c162b"
+version = "1.11.0"
 
 [[deps.TOML]]
 deps = ["Dates"]
@@ -342,18 +379,21 @@ version = "1.10.0"
 [[deps.Test]]
 deps = ["InteractiveUtils", "Logging", "Random", "Serialization"]
 uuid = "8dfed614-e22c-5e08-85e1-65c5234f0b40"
+version = "1.11.0"
 
 [[deps.TranscodingStreams]]
-git-tree-sha1 = "e84b3a11b9bece70d14cce63406bbc79ed3464d2"
+git-tree-sha1 = "0c45878dcfdcfa8480052b6ab162cdd138781742"
 uuid = "3bb67fe8-82b1-5028-8e26-92a6c54297fa"
-version = "0.11.2"
+version = "0.11.3"
 
 [[deps.UUIDs]]
 deps = ["Random", "SHA"]
 uuid = "cf7118a7-6976-5b1a-9a39-7adc72f591a4"
+version = "1.11.0"
 
 [[deps.Unicode]]
 uuid = "4ec0a83e-493e-50e2-b9ac-8f72acf5a8f5"
+version = "1.11.0"
 
 [[deps.Zlib_jll]]
 deps = ["Libdl"]
@@ -368,7 +408,7 @@ version = "5.11.0+0"
 [[deps.nghttp2_jll]]
 deps = ["Artifacts", "Libdl"]
 uuid = "8e850ede-7688-5339-a07c-302acd2aaf8d"
-version = "1.52.0+1"
+version = "1.59.0+0"
 
 [[deps.p7zip_jll]]
 deps = ["Artifacts", "Libdl"]

ext/HYPREPartitionedArrays.jl

@@ -14,14 +14,6 @@ using SparseMatricesCSR: SparseMatrixCSR, colvals
 # PartitionedArrays.PSparseMatrix -> HYPREMatrix #
 ##################################################
 
-function subarray_unsafe_supported()
-    # Wrapping of SubArrays as raw pointers may or may not be supported
-    # depending on the Julia version. If this is not supported, we have to fall
-    # back to allocation of an intermediate buffer. This logic can be removed if
-    # HYPRE.jl drops support for Julia < 1.9.
-    return VERSION >= v"1.9.0"
-end
-
 function Internals.to_hypre_data(
         A::SplitMatrix{<:SparseMatrixCSC}, r::AbstractLocalIndices, c::AbstractLocalIndices
     )
@@ -261,15 +253,8 @@ function Base.copy!(dst::PVector{<:AbstractVector{HYPRE_Complex}}, src::HYPREVec
         iu_src_part = o_to_g[end]
         nvalues = HYPRE_Int(iu_src_part - il_src_part + 1)
         indices = collect(HYPRE_BigInt, il_src_part:iu_src_part)
-        if subarray_unsafe_supported()
+        values = ov
-            values = ov
-        else
-            values = collect(HYPRE_Complex, ov)
-        end
         @check HYPRE_IJVectorGetValues(src, nvalues, indices, values)
-        if !subarray_unsafe_supported()
-            @. ov = values
-        end
     end
     return dst
 end
@@ -284,11 +269,7 @@ function Base.copy!(dst::HYPREVector, src::PVector{<:AbstractVector{HYPRE_Comple
         iupper_src_part = o_to_g[end]
         nvalues = HYPRE_Int(iupper_src_part - ilower_src_part + 1)
         indices = collect(HYPRE_BigInt, ilower_src_part:iupper_src_part)
-        if subarray_unsafe_supported()
+        values = ov
-            values = ov
-        else
-            values = collect(HYPRE_Complex, ov)
-        end
         @check HYPRE_IJVectorSetValues(dst, nvalues, indices, values)
     end
     # TODO: It shouldn't be necessary to assemble here since we only set owned rows (?)

src/HYPRE.jl

@@ -415,11 +415,4 @@ end
 include("solvers.jl")
 include("solver_options.jl")
 
-# Compatibility for Julias that doesn't support package extensions
-if !(isdefined(Base, :get_extension))
-    include("../ext/HYPREPartitionedArrays.jl")
-    include("../ext/HYPRESparseArrays.jl")
-    include("../ext/HYPRESparseMatricesCSR.jl")
-end
-
 end # module HYPRE